STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
serpine3Serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3; Belongs to the serpin family. (419 aa)    
Predicted Functional Partners:
habp2
Uncharacterized protein.
   
 0.688
LRIT2
Leucine rich repeat, Ig-like and transmembrane domains 2.
     
 0.596
ENSPREP00000026196
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 2.
     
 0.596
pdcd10
Programmed cell death 10b.
      
 0.581
agt
Angiotensinogen; Belongs to the serpin family.
  
  
 0.573
HGFAC
HGF activator.
   
 0.546
ENSPREP00000010844
SERPIN domain-containing protein; Belongs to the serpin family.
  
     0.535
st6galnac6
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
    
 
 0.531
Lrrc41
Uncharacterized protein.
      
 0.510
ints6
Integrator complex subunit 6.
      
 0.503
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.