STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103464879Fork-head domain-containing protein. (398 aa)    
Predicted Functional Partners:
serpinh1
Serpin peptidase inhibitor, clade H (heat shock protein 47), member 1b; Belongs to the serpin family.
      
 0.589
sox5
SRY-box transcription factor 5.
    
 
 0.532
prdm14
PR domain containing 14.
    
 0.518
runx3
Runt-related transcription factor.
    
 0.513
LOC103457845
Runt-related transcription factor.
    
 0.513
LOC103477443
Runt-related transcription factor.
    
 0.513
wdr5
WD repeat domain 5.
      
 0.503
ENSPREP00000000183
Uncharacterized protein.
      
 0.497
uncx
UNC homeobox.
      
 0.497
prox1
Prospero homeobox 1a.
      
 0.495
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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