STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
unc5bUnc-5 netrin receptor B. (929 aa)    
Predicted Functional Partners:
LOC103481112
Netrin 2.
    
 0.677
flrt3
Fibronectin leucine rich transmembrane 3.
    
 0.649
LOC103468394
Netrin 1b.
    
 0.625
flrt2
Fibronectin leucine rich transmembrane protein 2.
    
 0.562
LOC103457801
Fibronectin leucine rich transmembrane protein 2.
    
 0.562
NTN1
Netrin 1.
    
 0.552
LOC103480490
Netrin 5.
    
 0.543
agap3
ArfGAP with GTPase domain, ankyrin repeat and PH domain 3.
    
  0.523
LOC103456779
ArfGAP with GTPase domain, ankyrin repeat and PH domain 1.
    
  0.523
AGAP2
ArfGAP with GTPase domain, ankyrin repeat and PH domain 2.
    
  0.523
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.