Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC103477745Tumor necrosis factor b (TNF superfamily, member 2). (249 aa)    
Predicted Functional Partners:
tnfrsf1a
Tumor necrosis factor receptor superfamily, member 1a.
    
 0.985
LOC103467068
TNFR-Cys domain-containing protein.
   
 0.964
LOC103461485
TNFR-Cys domain-containing protein.
   
 0.964
ENSPREP00000030326
TNFR-Cys domain-containing protein.
   
 0.964
LOC103466970
TNFR-Cys domain-containing protein.
     
  0.917
LOC103461335
TNFR-Cys domain-containing protein.
     
  0.911
LOC103464471
Tumor necrosis factor receptor superfamily, member 1B.
     
 0.904
ENSPREP00000020171
TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.
     
 
0.900
LOC103470686
Interleukin-1.
   
  
 0.830
il10
Interleukin 10.
   
  
 0.698
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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