Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fam199xFamily with sequence similarity 199, X-linked. (381 aa)    
Predicted Functional Partners:
pdpk1
3-phosphoinositide dependent protein kinase 1b.
    
   0.911
wdr5
WD repeat domain 5.
    
   0.896
mbip
MAP3K12 binding inhibitory protein 1.
    
   0.732
gcnt7
Glucosaminyl (N-acetyl) transferase family member 7.
      
 0.710
ENSPREP00000026271
AMMECR1 domain-containing protein.
   
  
 0.589
wsb2
WD repeat and SOCS box containing 2.
    
   0.543
wsb1
WD repeat and SOCS box containing 1.
    
   0.543
zswim8
Zinc finger, SWIM-type containing 8.
    
   0.494
TMEM164
Transmembrane protein 164.
      
 0.460
osbpl9
Oxysterol-binding protein; Belongs to the OSBP family.
      
 0.421
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (6%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.