STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103468816Sidekick cell adhesion molecule 2a. (2156 aa)    
Predicted Functional Partners:
LOC103474226
Zgc:112083.
      
 0.590
mre11
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
    
 0.505
ENSPREP00000009976
DENN/MADD domain containing 6B.
      
 0.503
itgb8
Integrin beta; Belongs to the integrin beta chain family.
    
 0.472
LOC103471319
Bicaudal C homolog 2.
      
 0.459
bicc1
BicC family RNA binding protein 1a.
      
 0.459
SLC35F2
Solute carrier family 35 member F2.
      
 0.459
LOC103475083
Info solute carrier family 35 member F2, like.
      
 0.459
ENSPREP00000016704
Uncharacterized protein.
     
 0.424
Znf516
Uncharacterized protein.
     
 0.424
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.