STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
klhdc8bKelch domain containing 8B. (354 aa)    
Predicted Functional Partners:
cct5
Chaperonin containing TCP1, subunit 5 (epsilon).
    
   0.903
cct3
T-complex protein 1 subunit gamma.
    
 
 0.797
cct7
T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.
    
   0.792
pex7
Peroxisomal biogenesis factor 7.
    
   0.759
rrp36
Ribosomal RNA processing 36.
      
 0.727
txndc9
Thioredoxin domain containing 9.
    
   0.725
trappc6a
Trafficking protein particle complex 6b-like.
   
  
 0.676
ENSPREP00000002402
Uncharacterized protein.
      
 0.670
kcng3
Potassium voltage-gated channel, subfamily G, member 3; Belongs to the potassium channel family.
      
 0.669
TOGARAM1
TOG array regulator of axonemal microtubules 1.
      
 0.653
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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