STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103468815CDC42 effector protein (Rho GTPase binding) 4a. (346 aa)    
Predicted Functional Partners:
baiap2l1
BAI1-associated protein 2-like 1b.
   
 
 0.557
ENSPREP00000022854
BAI1-associated protein 2-like 1a.
   
 
 0.557
rhoh
Ras homolog family member H.
    
 0.550
rhoq
Ras homolog family member Q.
    
 0.550
septin10
Septin 10; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.
    
 
 0.486
LOC103472837
Uncharacterized protein.
    
 0.470
CDC42
Cell division cycle 42.
    
 0.470
LOC103477993
Uncharacterized protein.
    
 0.470
LOC103477991
Uncharacterized protein.
    
 0.470
LOC103465423
Cell division cycle 42.
    
 0.470
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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