Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rnf157Ring finger protein 157. (701 aa)    
Predicted Functional Partners:
ankrd46
Ankyrin repeat domain 46b.
    
   0.646
ENSPREP00000009816
Attractin-like 1a.
   
 
 0.613
atrn
Attractin.
   
 
 0.613
LOC103460885
Uncharacterized protein.
   
 
 0.613
megf8
Multiple EGF-like-domains 8.
   
 
 0.613
MOSMO
Modulator of smoothened.
    
 
 0.612
cracd
Si:dkeyp-117h8.2.
    
 
 0.602
unc45b
Unc-45 myosin chaperone B.
      
 0.597
LOC103478140
Thioesterase superfamily member 4.
      
 0.597
unc45a
Unc-45 myosin chaperone A.
      
 0.597
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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