STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppm1bProtein phosphatase, Mg2+/Mn2+ dependent, 1Ba. (380 aa)    
Predicted Functional Partners:
map3k7
Mitogen-activated protein kinase kinase kinase 7.
   
 0.916
ENSPREP00000018384
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.916
LOC103481540
Protein phosphatase, Mg2+/Mn2+ dependent, 1Bb.
  
  
 
0.901
LOC103477564
Rapunzel 5.
      
 0.550
prkaa2
Non-specific serine/threonine protein kinase.
   
 0.524
prkaa1
Non-specific serine/threonine protein kinase.
   
 0.524
arih1
RBR-type E3 ubiquitin transferase.
   
 
 0.522
mtfmt
Mitochondrial methionyl-tRNA formyltransferase.
  
   0.505
slc3a1
Solute carrier family 3 member 1.
 
 
  
 0.491
LOC103473220
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 
 0.466
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.