STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
neto2Neuropilin (NRP) and tolloid (TLL)-like 2b. (662 aa)    
Predicted Functional Partners:
kars1
Lysine--tRNA ligase.
      
 0.533
GRIK3
Glutamate ionotropic receptor kainate type subunit 3.
    
 
 0.430
LOC103457461
Uncharacterized protein.
    
 
 0.430
LOC103475531
Glutamate receptor, ionotropic, kainate 1a.
    
 
 0.430
LOC103474988
Glutamate receptor, ionotropic, kainate 1b.
    
 
 0.430
GRIK2
Glutamate ionotropic receptor kainate type subunit 2.
    
 
 0.430
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.