Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
vcpip1Valosin containing protein (p97)/p47 complex interacting protein 1. (1172 aa)    
Predicted Functional Partners:
ufd1
Ubiquitin recognition factor in ER associated degradation 1.
    
 
 0.980
ubxn7
UBX domain protein 7.
   
 
 0.966
ubxn2a
UBX domain protein 2A.
   
 
 0.962
nsfl1c
NSFL1 (p97) cofactor (p47).
   
 
 0.959
LOC103482061
Zgc:136908; Belongs to the AAA ATPase family.
   
 
 0.950
vcp
Valosin containing protein; Belongs to the AAA ATPase family.
   
 
 0.950
faf2
Fas associated factor family member 2.
    
 
 0.869
nploc4
NPL4 homolog, ubiquitin recognition factor.
    
 
 0.854
FAAP100
FA core complex associated protein 100.
    
 
 0.854
sprtn
SprT-like N-terminal domain.
    
 
 0.821
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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