Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lrgukLeucine-rich repeats and guanylate kinase domain containing. (740 aa)    
Predicted Functional Partners:
ak9
Adenylate kinase 9.
   
 0.887
ENSPREP00000027150
Uncharacterized protein.
    
 0.868
dpy30
Dpy-30 histone methyltransferase complex regulatory subunit.
   
 0.859
cfap99
Cilia and flagella associated protein 99.
    
 0.842
ENSPREP00000014094
NDK domain-containing protein.
  
 0.825
morn3
MORN repeat containing 3.
    
 
 0.812
mycbp
Uncharacterized protein.
    
 
 0.773
LOC103472997
MYC binding protein.
    
 
 0.773
ppp1cb
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 0.772
LOC103468963
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 0.772
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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