STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dusp28Dual specificity phosphatase 28. (149 aa)    
Predicted Functional Partners:
LOC103460202
Si:dkey-69o16.5.
      
 0.787
WDR33
WD repeat domain 33.
   
 0.697
zc3h15
Zinc finger CCCH-type containing 15.
   
  
 0.684
mettl22
Methyltransferase like 22.
   
  
 0.665
dnajc22
DnaJ (Hsp40) homolog, subfamily C, member 22.
   
 
 0.624
mycbpap
Mycbp associated protein.
    
 
 0.599
slc9a8
Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
      
 0.573
LOC103460587
Uncharacterized protein.
    
 0.554
fam120b
Family with sequence similarity 120B.
    
 0.529
CEP97
Centrosomal protein 97.
   
  
 0.528
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.