STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
wdfy2WD repeat and FYVE domain containing 2. (377 aa)    
Predicted Functional Partners:
cdc123
Cell division cycle protein 123 homolog; Required for S phase entry of the cell cycle. Belongs to the CDC123 family.
   
 
 0.675
cenpn
Centromere protein N.
   
 
 0.661
cdc16
Cell division cycle 16 homolog (S. cerevisiae).
   
 0.639
tbc1d31
TBC1 domain family, member 31.
     
 0.638
nudcd1
NudC domain containing 1.
    
   0.627
fibp
Fibroblast growth factor (acidic) intracellular binding protein a.
    
  0.571
gak
Cyclin G associated kinase.
   
  0.542
supt7l
SPT7 like, STAGA complex gamma subunit.
    
 0.534
slc17a5
Solute carrier family 17 member 5.
      
 0.532
ENSPREP00000031469
Uncharacterized protein.
      
 0.531
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.