STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srsf2Serine and arginine rich splicing factor 2a. (236 aa)    
Predicted Functional Partners:
nxf1
Zgc:153681.
   
 0.962
LOC103464577
RRM domain-containing protein.
   
0.959
SRSF3
Serine and arginine rich splicing factor 3.
   
0.959
LOC103473757
Serine and arginine rich splicing factor 9.
   
 0.944
LOC103475485
Uncharacterized protein.
  
0.943
LOC103474154
Serine and arginine rich splicing factor 1a.
   
0.939
LOC103464909
SRSF protein kinase 1b.
    
 0.938
slu7
SLU7 homolog, splicing factor.
    
 0.932
cdc40
Cell division cycle 40 homolog (S. cerevisiae).
     
 0.921
dhx38
DEAH (Asp-Glu-Ala-His) box polypeptide 38.
   
 
 0.920
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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