STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
srsf2Serine and arginine rich splicing factor 2a. (236 aa)    
Predicted Functional Partners:
zrsr2
Zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2.
   
 0.990
LOC103473757
Serine and arginine rich splicing factor 9.
   
 0.981
LOC103464577
RRM domain-containing protein.
   
 0.973
SRSF3
Serine and arginine rich splicing factor 3.
   
 0.973
nxf1
Zgc:153681.
   
 0.973
LOC103474154
Serine and arginine rich splicing factor 1a.
   
 0.967
LOC103475485
Uncharacterized protein.
   
 0.967
dhx38
DEAH (Asp-Glu-Ala-His) box polypeptide 38.
   
 
 0.964
LOC103469127
Aly/REF export factor.
   
 0.959
cdc40
Cell division cycle 40 homolog (S. cerevisiae).
     
 0.956
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.