Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC103479584Rho GTPase activating protein 21b. (1781 aa)    
Predicted Functional Partners:
ENSPREP00000013988
Uncharacterized protein.
    
 
 0.569
LOC103462893
Chitin synthase 1.
      
 0.567
ctnnb1
Catenin (cadherin-associated protein), beta 1.
   
 
 0.544
LOC103470725
G-rich RNA sequence binding factor 1.
   
  
 0.539
rhof
Ras homolog family member F.
    
 0.537
RND1
Rho family GTPase 1.
    
 0.513
rnd3
Rho family GTPase 3a.
    
 0.513
LOC103467313
Rho family GTPase 1b.
    
 0.513
CDC42
Cell division cycle 42.
   
 0.468
LOC103465423
Cell division cycle 42.
   
 0.468
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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