STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
srgap2SLIT-ROBO Rho GTPase activating protein 2. (1124 aa)    
Predicted Functional Partners:
LOC103467010
Cyclin-dependent kinase 11B.
   
  
 0.922
ddx43
DEAD (Asp-Glu-Ala-Asp) box polypeptide 43; Belongs to the DEAD box helicase family.
   
  
 0.804
LOC103481653
Uncharacterized protein.
      
 0.727
atad2
ATPase family AAA domain containing 2.
   
  
 0.670
ATAD2
ATPase family AAA domain containing 2.
   
  
 0.670
ENSPREP00000015831
Uncharacterized protein.
   
 0.661
ENSPREP00000015870
Uncharacterized protein.
   
 0.661
ENSPREP00000015917
EH domain-containing protein.
   
 0.661
itsn2
Intersectin 2a.
   
 0.661
rxylt1
Ribitol xylosyltransferase 1.
      
 0.600
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.