STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
simc1Si:ch211-199b20.3. (858 aa)    
Predicted Functional Partners:
nsmce1
NSE1 homolog, SMC5-SMC6 complex component.
    
   0.789
Fam21c
Uncharacterized protein.
    
 
 0.785
smc6
Si:dkey-119f1.1.
    
  0.739
LOC103458344
Structural maintenance of chromosomes 6.
    
  0.739
ENSPREP00000016754
Melanocortin 2 receptor.
     
 0.672
Unc79
Uncharacterized protein.
    
 0.654
RAB24
RAB24, member RAS oncogene family.
   
 0.610
Ccnd3
Cyclin D3; Belongs to the cyclin family.
    
 
 0.601
LOC103479585
Phosphoribosyl transferase domain containing 1.
      
 0.596
LOC103466051
Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
      
 0.596
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.