STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
simc1Si:ch211-199b20.3. (858 aa)    
Predicted Functional Partners:
Unc79
Uncharacterized protein.
    
 0.768
ENSPREP00000016754
Melanocortin 2 receptor.
     
 0.552
LOC103461037
RAN binding protein 2.
    
 0.533
RAB24
RAB24, member RAS oncogene family.
   
 0.495
LOC103456580
Uncharacterized protein.
  
 0.493
LOC103470961
Matrin-type domain-containing protein.
  
  0.487
numa1
Calponin-homology (CH) domain-containing protein.
  
 0.486
usf3
Upstream transcription factor family member 3.
  
     0.467
rbbp5
Retinoblastoma binding protein 5.
    
 0.465
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.461
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.