STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
clg14h20orf27Si:ch211-74f19.2. (174 aa)    
Predicted Functional Partners:
LOC103468963
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.747
ppp1cc
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.747
LOC103481373
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.747
psme3
Proteasome activator subunit 3.
      
 0.587
ppp1cb
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.551
PPP1CB
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.551
wdr20
WD repeat domain 20a.
    
 0.543
LOC103475215
DM1 locus, WD repeat containing.
    
 0.543
LOC103473232
Torsin family 4, member Aa.
      
 0.503
LOC103457914
WD repeat domain 20b.
    
 0.451
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.