STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
baz1aBromodomain adjacent to zinc finger domain, 1A. (1068 aa)    
Predicted Functional Partners:
chrac1
Chromatin accessibility complex subunit 1.
   
 0.995
pole3
Polymerase (DNA directed), epsilon 3 (p17 subunit).
    
 0.990
smarca5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
   
 0.987
baz1b
Bromodomain adjacent to zinc finger domain, 1B.
   
0.901
mecp2
Methyl CpG binding protein 2.
    
 0.896
LOC103481180
Bromo domain-containing protein.
   
0.837
LOC103464463
Coiled-coil domain containing 114.
      
 0.700
hells
Helicase, lymphoid specific.
   
 0.686
BPTF
Bromodomain PHD finger transcription factor.
   
 
0.681
LOC103468399
Bromodomain PHD finger transcription factor.
   
 
0.681
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.