STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000005319Uncharacterized protein. (628 aa)    
Predicted Functional Partners:
LOC103460086
Uncharacterized protein.
    
 0.606
rab8b
Multiple EGF-like-domains 8.
    
 0.606
LOC103457353
RAB15, member RAS oncogene family.
    
 0.606
LOC103479775
RAB8A, member RAS oncogene family.
    
 0.606
rab8a
RAB8A, member RAS oncogene family.
    
 0.606
rab10
RAB10, member RAS oncogene family.
    
 0.606
rab13
RAB13, member RAS oncogene family.
    
 0.606
LOC103458514
RAB15, member RAS oncogene family.
    
 0.606
garem1
GRB2 associated, regulator of MAPK1.
    
 0.603
garem2
GRB2 associated, regulator of MAPK1-like.
    
 0.603
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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