STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sv2cSynaptic vesicle glycoprotein 2Ca. (734 aa)    
Predicted Functional Partners:
lamc1
Laminin, gamma 1.
    
 0.704
LOC103473396
Laminin, gamma 3.
    
 0.704
lamb3
Uncharacterized protein.
     
 0.691
ENSPREP00000006281
Uncharacterized protein.
    
 0.686
lama5
Laminin, alpha 5.
    
 0.686
lama4
Laminin, alpha 4.
    
 0.686
LAMB1
Laminin, beta 1a.
     
 0.673
Lamb2
Laminin, beta 2 (laminin S).
     
 0.673
ENSPREP00000014939
Uncharacterized protein.
    
 0.661
LOC103467060
Laminin, beta 2-like.
     
 0.659
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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