STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
klhl8Kelch-like family member 8. (614 aa)    
Predicted Functional Partners:
LOC103479391
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.963
LOC103474461
Cullin 3; Belongs to the cullin family.
    
 0.963
snrnp70
Small nuclear ribonucleoprotein 70 (U1).
   
   0.785
fbxo38
F-box protein 38.
   
  
 0.762
appbp2
Amyloid beta precursor protein (cytoplasmic tail) binding protein 2.
    
 0.752
znf511
Zinc finger protein 511.
    
 
 0.727
med27
Mediator complex subunit 27.
    
 
 0.707
rbx1
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.694
LOC103477463
BCL2 interacting protein like.
      
 0.670
fem1b
Fem-1 homolog b (C. elegans).
   
 0.633
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.