STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
crybg1Uncharacterized protein; Belongs to the beta/gamma-crystallin family. (3473 aa)    
Predicted Functional Partners:
LOC103471142
Melanin-concentrating hormone receptor 2; Belongs to the G-protein coupled receptor 1 family.
     
 0.729
Sar1a
Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.
     
 0.554
sar1b
Secretion associated, Ras related GTPase 1B; Belongs to the small GTPase superfamily. SAR1 family.
     
 0.554
LOC103476836
Secretion associated, Ras related GTPase 1Ab; Belongs to the small GTPase superfamily. SAR1 family.
     
 0.554
nop16
NOP16 nucleolar protein homolog (yeast).
      
 0.537
LOC103464766
Leucine rich repeat containing 38b.
    
 0.513
RELL1
RELT like 1.
      
 0.503
Pigw
Phosphatidylinositol-glycan biosynthesis class W protein; Probable acetyltransferase, which acetylates the inositol ring of phosphatidylinositol during biosynthesis of GPI-anchor.
      
 0.475
BACH1
BTB domain and CNC homolog 1.
  
     0.450
iyd
Iodotyrosine deiodinase.
      
 0.438
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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