STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
olig2Oligodendrocyte lineage transcription factor 2. (273 aa)    
Predicted Functional Partners:
LOC103458615
NK2 homeobox 2a.
   
 0.934
sox10
SRY-box transcription factor 10.
   
 
 0.899
ENSPREP00000018401
NK6 homeobox 1.
   
  
 0.762
shh
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
      
 0.668
elavl3
ELAV-like protein; Belongs to the RRM elav family.
   
  
 0.610
mnx1
Motor neuron and pancreas homeobox 1.
   
 0.605
CNP
2',3'-cyclic nucleotide 3' phosphodiesterase.
      
 0.597
LOC103471165
Proteolipid protein 1a.
   
  
 0.591
irx3
Iroquois homeobox 3a.
    
 
 0.586
LOC103475755
Proteolipid protein 1b.
   
  
 0.583
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.