STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abcg8ATP-binding cassette, sub-family G (WHITE), member 8. (669 aa)    
Predicted Functional Partners:
abcg5
ATP-binding cassette, sub-family G (WHITE), member 5.
  
0.998
hmgcr
3-hydroxy-3-methylglutaryl coenzyme A reductase.
      
 0.550
LOC103479251
Cytochrome P450, family 7, subfamily A, polypeptide 1; Belongs to the cytochrome P450 family.
   
 
 0.524
LOC103474828
Apolipoprotein A-Ib.
   
 0.516
nr1h3
Nuclear receptor subfamily 1, group H, member 3.
   
 0.500
LOC103474464
ATP-binding cassette, sub-family C (CFTR/MRP), member 4.
   
 0.495
LOC103477850
Uncharacterized protein.
   
 0.477
LOC103477849
Uncharacterized protein.
   
 0.477
nr1h4
Nuclear receptor subfamily 1, group H, member 4.
   
 0.476
LOC103467002
Nuclear receptor subfamily 1, group H, member 5.
   
 0.475
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (24%) [HD]