STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lamb2Laminin, beta 2 (laminin S). (836 aa)    
Predicted Functional Partners:
ENSPREP00000005312
Uncharacterized protein.
 
     0.919
LOC103466132
CD44 molecule (Indian blood group) b.
     
 0.901
ENSPREP00000032008
Laminin N-terminal domain-containing protein.
  
0.821
lamc1
Laminin, gamma 1.
   
0.808
ENSPREP00000028622
Uncharacterized protein.
   
0.808
LOC103473396
Laminin, gamma 3.
   
0.808
itga6
Integrin, alpha 6a; Belongs to the integrin alpha chain family.
    
 0.797
ITGA7
Integrin subunit alpha 7; Belongs to the integrin alpha chain family.
    
 0.797
LOC103479330
Integrin, alpha 6b; Belongs to the integrin alpha chain family.
    
 0.797
itga8
Integrin, alpha 8; Belongs to the integrin alpha chain family.
    
 0.789
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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