STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103468812Si:ch211-114m9.1. (982 aa)    
Predicted Functional Partners:
ENSPREP00000025381
Rho-GAP domain-containing protein.
    
   0.660
TRIP10
Thyroid hormone receptor interactor 10b.
    
 0.551
LOC103468878
Thyroid hormone receptor interactor 10a.
    
 0.551
CDC42
Cell division cycle 42.
   
 0.546
LOC103465423
Cell division cycle 42.
   
 0.546
ENSPREP00000024586
Angiomotin.
    
 
 0.533
LOC103466868
Carbohydrate sulfotransferase.
      
 0.481
LRRC9
Leucine rich repeat containing 9.
      
 0.481
Tymp
Thymidine phosphorylase.
      
 0.478
rps12
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
      
 0.471
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.