LOC103467684 protein (Poecilia reticulata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

LOC103467684

DnaJ (Hsp40) homolog, subfamily C, member 11a. (575 aa)

Predicted Functional Partners:

chchd3

0.921

mtx2

0.909

ENSPREP00000026706

0.843

armc1

0.843

ENSPREP00000006608

0.808

Immt

0.808

tmem11

0.807

Suox

0.785

rnf152

0.778

apool

0.777

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPREP00000006608	Immt	ENSPREP00000006608	ENSPREP00000006636	MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	0.917
ENSPREP00000006608	LOC103467684	ENSPREP00000006608	ENSPREP00000005412	MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	DnaJ (Hsp40) homolog, subfamily C, member 11a.	0.808
ENSPREP00000006608	apool	ENSPREP00000006608	ENSPREP00000031596	MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	MICOS complex subunit; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	0.951
ENSPREP00000006608	chchd3	ENSPREP00000006608	ENSPREP00000005390	MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	MICOS complex subunit; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	0.992
ENSPREP00000006608	mtx2	ENSPREP00000006608	ENSPREP00000009979	MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	Metaxin 2.	0.932
ENSPREP00000026706	LOC103467684	ENSPREP00000026706	ENSPREP00000005412	Uncharacterized protein.	DnaJ (Hsp40) homolog, subfamily C, member 11a.	0.843
ENSPREP00000026706	mtx2	ENSPREP00000026706	ENSPREP00000009979	Uncharacterized protein.	Metaxin 2.	0.432
Immt	ENSPREP00000006608	ENSPREP00000006636	ENSPREP00000006608	MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	0.917
Immt	LOC103467684	ENSPREP00000006636	ENSPREP00000005412	MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	DnaJ (Hsp40) homolog, subfamily C, member 11a.	0.808
Immt	apool	ENSPREP00000006636	ENSPREP00000031596	MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	MICOS complex subunit; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	0.951
Immt	chchd3	ENSPREP00000006636	ENSPREP00000005390	MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	MICOS complex subunit; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	0.992
Immt	mtx2	ENSPREP00000006636	ENSPREP00000009979	MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	Metaxin 2.	0.932
LOC103467684	ENSPREP00000006608	ENSPREP00000005412	ENSPREP00000006608	DnaJ (Hsp40) homolog, subfamily C, member 11a.	MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	0.808
LOC103467684	ENSPREP00000026706	ENSPREP00000005412	ENSPREP00000026706	DnaJ (Hsp40) homolog, subfamily C, member 11a.	Uncharacterized protein.	0.843
LOC103467684	Immt	ENSPREP00000005412	ENSPREP00000006636	DnaJ (Hsp40) homolog, subfamily C, member 11a.	MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	0.808
LOC103467684	Suox	ENSPREP00000005412	ENSPREP00000021510	DnaJ (Hsp40) homolog, subfamily C, member 11a.	Sulfite oxidase.	0.785
LOC103467684	apool	ENSPREP00000005412	ENSPREP00000031596	DnaJ (Hsp40) homolog, subfamily C, member 11a.	MICOS complex subunit; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	0.777
LOC103467684	armc1	ENSPREP00000005412	ENSPREP00000029313	DnaJ (Hsp40) homolog, subfamily C, member 11a.	Armadillo repeat-containing protein 1.	0.843
LOC103467684	chchd3	ENSPREP00000005412	ENSPREP00000005390	DnaJ (Hsp40) homolog, subfamily C, member 11a.	MICOS complex subunit; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	0.921
LOC103467684	mtx2	ENSPREP00000005412	ENSPREP00000009979	DnaJ (Hsp40) homolog, subfamily C, member 11a.	Metaxin 2.	0.909