Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rgp1GP1 homolog, RAB6A GEF complex partner 1. (386 aa)    
Predicted Functional Partners:
RIC1
RIC1 homolog, RAB6A GEF complex partner 1.
    
 0.998
RAB41
RAB41, member RAS oncogene family.
    
 0.849
rab6a
RAB6A, member RAS oncogene family.
    
 0.849
LOC103479611
RAB6B, member RAS oncogene family.
    
 0.836
LOC103463948
RAB6B, member RAS oncogene family a.
    
 0.836
cog8
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
    
 0.827
cog6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 0.809
rab34
RAB34, member RAS oncogene family a.
    
 0.759
LOC103475607
RAB34, member RAS oncogene family b.
    
 0.759
ENSPREP00000014829
Uncharacterized protein.
    
 0.759
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.