STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000005434BHLH domain-containing protein. (212 aa)    
Predicted Functional Partners:
LOC103465907
Inhibitor of DNA binding 4.
    
 
 0.570
sox10
SRY-box transcription factor 10.
   
 0.569
LOC103458615
NK2 homeobox 2a.
   
 0.543
mag
Myelin associated glycoprotein.
   
  
 0.478
LOC103478495
Si:dkey-238d18.5.
   
  
 0.477
LOC103478494
Si:ch73-380l3.2.
   
  
 0.477
ENSPREP00000029699
Myelin protein zero.
      
 0.473
gart
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
   
  
 0.445
atoh1
Atonal bHLH transcription factor 1a.
   
 
 0.404
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.