Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cfap45Cilia and flagella associated protein 45. (524 aa)    
Predicted Functional Partners:
efhc1
EF-hand domain (C-terminal) containing 1.
  
 
 0.938
cfap20
Cilia and flagella associated protein 20.
    
 
 0.909
drc7
Uncharacterized protein.
   
 
 0.905
Pacrg
PARK2 co-regulated.
   
 
 0.888
tekt2
Tektin 2 (testicular).
   
 
 0.881
rsph3
Radial spoke head 3.
   
 
 0.879
LOC103470385
Cilia and flagella associated protein 52.
   
 
 0.873
ENSPREP00000024730
Uncharacterized protein.
   
 
 0.873
dnai2
Dynein, axonemal, intermediate chain 2b.
   
 
 0.867
efhc2
EF-hand domain (C-terminal) containing 2.
   
 
 0.862
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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