STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rassf5Ras association domain family member 5. (380 aa)    
Predicted Functional Partners:
RASSF1
Ras association domain family member 1.
    
 
 0.894
LOC103465103
Ras association domain family member 1.
    
 
 0.894
stk3
Serine/threonine kinase 3 (STE20 homolog, yeast).
    
 0.885
LOC103464816
Uncharacterized protein.
    
 0.885
sav1
Salvador family WW domain containing protein 1.
    
 
 0.781
rassf2
Ras association domain family member 2a.
    
 
 0.779
rassf4
Ras association domain family member 4a.
    
 
 0.779
rabif
RAB interacting factor.
    
 
 0.672
CSDE1
Cold shock domain containing E1, RNA-binding.
    
 
 0.611
LOC103469088
Zgc:55558.
    
 
 0.611
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.