STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
msmpSi:ch211-69e13.6. (129 aa)    
Predicted Functional Partners:
gba2
Non-lysosomal glucosylceramidase; Non-lysosomal glucosylceramidase that catalyzes the hydrolysis of glucosylceramide (GlcCer) to free glucose and ceramide.
      
 0.545
Fam21c
Uncharacterized protein.
      
 0.487
klhl31
Kelch-like family member 31.
      
 0.470
syf2
SYF2 pre-mRNA-splicing factor.
      
 0.456
washc1
WAS protein family homolog 1.
      
 0.448
LOC103476626
Luteinizing hormone, beta polypeptide.
      
 0.407
LOC103463597
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
      
 0.405
St6galnac5
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
      
 0.405
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.