LOC103480200 protein (Poecilia reticulata) - STRING interaction network

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Score

LOC103480200

RNA binding motif protein 4.2. (376 aa)

Predicted Functional Partners:

LOC103480119

0.984

ncbp2

0.837

clg6hxorf56

0.788

SNRPC

0.752

sf3b4

0.741

hnrnpm

0.718

LOC103473466

0.705

hnrnpk

0.705

dhx9

0.696

sf1

0.682

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103473466	LOC103480200	ENSPREP00000004020	ENSPREP00000005456	Heterogeneous nuclear ribonucleoprotein K, like.	RNA binding motif protein 4.2.	0.705
LOC103473466	dhx9	ENSPREP00000004020	ENSPREP00000028546	Heterogeneous nuclear ribonucleoprotein K, like.	DEAH (Asp-Glu-Ala-His) box helicase 9.	0.902
LOC103473466	hnrnpk	ENSPREP00000004020	ENSPREP00000028098	Heterogeneous nuclear ribonucleoprotein K, like.	Heterogeneous nuclear ribonucleoprotein K.	0.901
LOC103473466	hnrnpm	ENSPREP00000004020	ENSPREP00000023868	Heterogeneous nuclear ribonucleoprotein K, like.	Heterogeneous nuclear ribonucleoprotein M.	0.997
LOC103473466	ncbp2	ENSPREP00000004020	ENSPREP00000031952	Heterogeneous nuclear ribonucleoprotein K, like.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.866
LOC103473466	sf1	ENSPREP00000004020	ENSPREP00000005971	Heterogeneous nuclear ribonucleoprotein K, like.	Splicing factor 1.	0.769
LOC103480119	LOC103480200	ENSPREP00000005363	ENSPREP00000005456	RNA binding motif protein 4.1.	RNA binding motif protein 4.2.	0.984
LOC103480119	hnrnpm	ENSPREP00000005363	ENSPREP00000023868	RNA binding motif protein 4.1.	Heterogeneous nuclear ribonucleoprotein M.	0.432
LOC103480119	ncbp2	ENSPREP00000005363	ENSPREP00000031952	RNA binding motif protein 4.1.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.463
LOC103480200	LOC103473466	ENSPREP00000005456	ENSPREP00000004020	RNA binding motif protein 4.2.	Heterogeneous nuclear ribonucleoprotein K, like.	0.705
LOC103480200	LOC103480119	ENSPREP00000005456	ENSPREP00000005363	RNA binding motif protein 4.2.	RNA binding motif protein 4.1.	0.984
LOC103480200	SNRPC	ENSPREP00000005456	ENSPREP00000019263	RNA binding motif protein 4.2.	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...]	0.752
LOC103480200	clg6hxorf56	ENSPREP00000005456	ENSPREP00000001402	RNA binding motif protein 4.2.	Zgc:103697.	0.788
LOC103480200	dhx9	ENSPREP00000005456	ENSPREP00000028546	RNA binding motif protein 4.2.	DEAH (Asp-Glu-Ala-His) box helicase 9.	0.696
LOC103480200	hnrnpk	ENSPREP00000005456	ENSPREP00000028098	RNA binding motif protein 4.2.	Heterogeneous nuclear ribonucleoprotein K.	0.705
LOC103480200	hnrnpm	ENSPREP00000005456	ENSPREP00000023868	RNA binding motif protein 4.2.	Heterogeneous nuclear ribonucleoprotein M.	0.718
LOC103480200	ncbp2	ENSPREP00000005456	ENSPREP00000031952	RNA binding motif protein 4.2.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.837
LOC103480200	sf1	ENSPREP00000005456	ENSPREP00000005971	RNA binding motif protein 4.2.	Splicing factor 1.	0.682
LOC103480200	sf3b4	ENSPREP00000005456	ENSPREP00000016377	RNA binding motif protein 4.2.	Splicing factor 3b, subunit 4.	0.741
SNRPC	LOC103480200	ENSPREP00000019263	ENSPREP00000005456	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...]	RNA binding motif protein 4.2.	0.752