STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103462305Low density lipoprotein receptor-related protein 3. (749 aa)    
Predicted Functional Partners:
aplp1
Amyloid beta (A4) precursor-like protein 1.
    
 0.689
ENSPREP00000020277
RBR-type E3 ubiquitin transferase.
      
 0.614
fkrp
Fukutin related protein.
     
 0.603
ENSPREP00000013860
Glycerophosphodiester phosphodiesterase domain containing 2.
      
 0.577
rbbp5
Retinoblastoma binding protein 5.
      
 0.534
ENSPREP00000015831
Uncharacterized protein.
    
 0.520
ENSPREP00000015870
Uncharacterized protein.
    
 0.520
ENSPREP00000015917
EH domain-containing protein.
    
 0.520
itsn2
Intersectin 2a.
    
 0.520
srd5a3
Steroid 5 alpha-reductase 3.
      
 0.503
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.