STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dync2li1Dynein, cytoplasmic 2, light intermediate chain 1. (318 aa)    
Predicted Functional Partners:
wdr60
WD repeat domain 60.
    
 0.999
wdr34
WD repeat domain 34.
    
 0.996
tctex1d2
Tctex1 domain containing 2.
   
 0.987
TCTEX1D1
Tctex1 domain containing 1.
   
 0.914
DYNLRB2
Dynein light chain roadblock.
    
 0.912
LOC103474153
Dynein light chain.
    
 0.880
ENSPREP00000014727
Dynein light chain.
    
 0.880
LOC103470030
Dynein light chain.
    
 0.880
LOC103475484
Dynein light chain.
    
 0.880
dynlt1
Dynein, light chain, Tctex-type 1.
    
 0.875
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.