Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC103481790Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (251 aa)    
Predicted Functional Partners:
rp2
Protein XRP2; Acts as a GTPase-activating protein (GAP) for tubulin in concert with tubulin-specific chaperone C, but does not enhance tubulin heterodimerization.
    
 0.940
pde6d
60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.
   
 0.911
LOC103475648
Unc-119 lipid binding chaperone.
    
 0.867
unc119
Unc-119 lipid binding chaperone.
    
 0.867
cfap36
Cilia and flagella associated protein 36.
   
 
 0.850
tbcc
Tubulin folding cofactor C.
    
 0.810
arl2bp
ADP-ribosylation factor-like 2 binding protein.
    
 
 0.786
appl1
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.
    
 0.739
appl2
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
    
 0.739
nphp3
Nephronophthisis 3.
    
 0.719
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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