STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
odf2Outer dense fiber of sperm tails 2b. (749 aa)    
Predicted Functional Partners:
Unc79
Uncharacterized protein.
    
 0.768
LOC103461037
RAN binding protein 2.
    
 0.533
haus8
Uncharacterized protein.
  
  
  0.519
PLK1
Serine/threonine-protein kinase PLK.
    
 0.484
plk3
Serine/threonine-protein kinase PLK.
    
 0.484
plk2
Serine/threonine-protein kinase PLK.
    
 0.484
rnf4
RING-type domain-containing protein.
    
   0.483
LOC103466495
RAB3A interacting protein (rabin3)-like 1.
    
 0.480
rab3ip
RAB3A interacting protein (rabin3).
    
 0.480
rbbp5
Retinoblastoma binding protein 5.
    
 0.465
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.