STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cep89Centrosomal protein 89. (748 aa)    
Predicted Functional Partners:
cep83
Centrosomal protein 83.
     
 0.961
CEP164
Centrosomal protein 164.
     
 0.868
ncs1
Neuronal calcium sensor 1a.
    
 0.866
fbf1
Uncharacterized protein.
     
 0.863
sclt1
Sodium channel and clathrin linker 1.
     
 0.818
nin
Ninein (GSK3B interacting protein).
     
 0.755
cep76
Centrosomal protein 76.
     
 0.745
lrrc45
Leucine rich repeat containing 45.
     
 0.718
ENSPREP00000005251
POC5 centriolar protein homolog (Chlamydomonas).
      
 0.708
ift88
Intraflagellar transport 88 homolog.
      
 0.693
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.