STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PAM16Presequence translocase associated motor 16. (129 aa)    
Predicted Functional Partners:
LOC103469186-2
Coronin; Belongs to the WD repeat coronin family.
 
      0.847
LOC103460599
Coronin; Belongs to the WD repeat coronin family.
 
      0.846
klhl20
Kelch-like family member 20.
    
 
 0.729
timm17b
Translocase of inner mitochondrial membrane 17 homolog B (yeast).
     
  0.540
dnajc15
DnaJ (Hsp40) homolog, subfamily C, member 15.
     
  0.540
grpel1
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
     
  0.540
Timm17a
Uncharacterized protein.
     
  0.540
timm23
Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.
     
  0.540
timm21
Uncharacterized protein.
     
  0.540
romo1
Reactive oxygen species modulator 1.
     
  0.540
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.