STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103464539Inka box actin regulator 1b. (312 aa)    
Predicted Functional Partners:
PAK6
P21 protein (Cdc42/Rac)-activated kinase 6b.
    
 
 0.705
pak5
Non-specific serine/threonine protein kinase.
    
 
 0.705
pak4
Non-specific serine/threonine protein kinase.
    
 
 0.705
pak6
Non-specific serine/threonine protein kinase.
    
 
 0.705
Suox
Sulfite oxidase.
      
 0.531
LOC103469134
Uncharacterized protein.
      
 0.465
LOC103467751
Uncharacterized protein.
      
 0.465
LOC103458433
Non-specific serine/threonine protein kinase.
    
 
 0.414
pak1
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 
 0.414
pak2
Non-specific serine/threonine protein kinase.
    
 
 0.414
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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