STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103460599Coronin; Belongs to the WD repeat coronin family. (732 aa)    
Predicted Functional Partners:
PAM16
Presequence translocase associated motor 16.
 
      0.846
LOC103469186
Mitochondrial import inner membrane translocase subunit TIM16-like.
 
      0.846
klhl20
Kelch-like family member 20.
    
 
 0.774
arpc3
Actin related protein 2/3 complex, subunit 3.
    
 
 0.497
ENSPREP00000013033
Uncharacterized protein.
    
 
 0.472
LOC103460840
Uncharacterized protein; Belongs to the actin family.
    
 
 0.472
ACTR3C
Actin related protein 3C; Belongs to the actin family.
    
 
 0.472
ACTR3
Actin related protein 3; Belongs to the actin family.
    
 
 0.472
KLHL28
Kelch like family member 28.
    
 
 0.437
LOC103468246
Actin-related protein 2/3 complex subunit 5; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Arp2/3 complex plays a critical role in the control of cell morphogenesis via the modulation of cell polarity development.
    
 
 0.429
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.