STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tbcdTubulin folding cofactor D. (1231 aa)    
Predicted Functional Partners:
tbcc
Tubulin folding cofactor C.
    
 0.993
arl2
ADP-ribosylation factor-like 2; Belongs to the small GTPase superfamily. Arf family.
    
 0.985
tbce
Tubulin folding cofactor E.
    
 0.981
tbcb
Tubulin folding cofactor B.
    
 0.970
tbca
Tubulin-specific chaperone A; Belongs to the TBCA family.
    
 0.966
mad1l1
Mitotic arrest deficient 1 like 1.
   
 
 0.913
pfdn4
Prefoldin subunit 4.
    
 
 0.913
mad2l1
MAD2 mitotic arrest deficient-like 1 (yeast).
    
 
 0.904
rp2
Protein XRP2; Acts as a GTPase-activating protein (GAP) for tubulin in concert with tubulin-specific chaperone C, but does not enhance tubulin heterodimerization.
    
 0.836
pfdn5
Prefoldin 5.
    
 
 0.808
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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