STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cep170Centrosomal protein 170Aa. (1515 aa)    
Predicted Functional Partners:
ENSPREP00000000650
FHA domain-containing protein.
 
      0.900
cep131
Centrosomal protein 131.
    
 0.544
ENSPREP00000012400
Uncharacterized protein.
    
  0.509
nin
Ninein (GSK3B interacting protein).
    
 
 0.507
Haus1
HAUS augmin-like complex, subunit 1.
     
 0.485
LOC103460247
Si:ch211-169p10.1.
    
 
 0.474
ccdc120
Coiled-coil domain containing 120.
    
 
 0.474
ints9
Integrator complex subunit 9.
    
 
 0.461
ENSPREP00000003546
WD repeat domain 62.
    
 
 0.437
ENSPREP00000006780
WD_REPEATS_REGION domain-containing protein.
    
 
 0.437
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.