STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103465732Structural maintenance of chromosomes protein. (1250 aa)    
Predicted Functional Partners:
smc3
Structural maintenance of chromosomes protein.
   
0.997
LOC103472890
RAD21 cohesin complex component b.
   
 0.985
LOC103467726
RAD21 cohesin complex component like 1.
   
 0.985
LOC103478347
RAD21 cohesin complex component a.
   
 0.985
espl1
Extra spindle pole bodies like 1, separase.
   
 0.981
stag1
Stromal antigen 1a.
   
 0.974
Stag3
SCD domain-containing protein.
   
 0.974
LOC103470908
Stromal antigen 2b.
   
 0.974
LOC103475746
Stromal antigen 2a.
   
 0.974
Rbm20
Matrin-type domain-containing protein.
   
 0.958
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.