STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tns4SH2 domain-containing protein. (572 aa)    
Predicted Functional Partners:
ENSPREP00000025092
Uncharacterized protein.
 
 
    0.900
Tns1
Phosphatase tensin-type domain-containing protein.
 
 
  
 0.869
itgb1
Integrin beta; Belongs to the integrin beta chain family.
   
 0.678
LOC103482508
Integrin beta.
   
 0.678
LOC103479472
Integrin beta; Belongs to the integrin beta chain family.
   
 0.678
ENSPREP00000015306
Ig-like domain-containing protein.
      
 0.589
LOC103469372
Integrin beta; Belongs to the integrin beta chain family.
   
 0.570
itgb5
Integrin beta; Belongs to the integrin beta chain family.
   
 0.570
itgb3
Integrin beta; Belongs to the integrin beta chain family.
   
 0.570
kif3b
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.558
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.