STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000005618Uncharacterized protein. (1359 aa)    
Predicted Functional Partners:
ENSPREP00000005674
Uncharacterized protein.
 
      0.899
utrn
Uncharacterized protein.
 
      0.892
drp2
Dystrophin related protein 2.
 
    
 0.796
ENSPREP00000018131
Uncharacterized protein.
 
 
    0.693
neb
Nebulin.
     
 0.568
ctnnal1
Catenin (cadherin-associated protein), alpha-like 1.
   
 
 0.513
ENSPREP00000025758
Peptidase S72 domain-containing protein.
    
 0.503
dag1
Dystroglycan 1.
    
 0.503
sntg1
Syntrophin, gamma 1.
    
 
 0.493
ENSPREP00000013027
Dystrobrevin, alpha.
 
 
 
 0.448
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.