STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103473192Uncharacterized protein. (1048 aa)    
Predicted Functional Partners:
bub3
BUB3 mitotic checkpoint protein.
    
 0.497
ckap5
Cytoskeleton associated protein 5.
    
 
 0.458
dctn2
Dynactin 2 (p50).
    
 
 0.456
mapre1
Microtubule-associated protein, RP/EB family, member 1b.
    
 
 0.419
LOC103467741
DNA (cytosine-5-)-methyltransferase 3 beta, duplicate a; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
    
 
 0.419
mapre2
Microtubule-associated protein, RP/EB family, member 2.
    
 
 0.419
LOC103458373
Microtubule-associated protein, RP/EB family, member 3a.
    
 
 0.419
LOC103457273
Microtubule-associated protein, RP/EB family, member 3b.
    
 
 0.419
mad2l1
MAD2 mitotic arrest deficient-like 1 (yeast).
    
  0.405
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.